Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfa family protein | JYB84_14605 | O14034 | Negative | 3309520 - 3309960 | 16471.5 |
| malate synthase | JYB84_14610 | Q5P811 | Negative | 3310128 - 3310589 | 17083.4 |
| duf3612 domain-containing protein | JYB84_14615 | Not Available | Positive | 3310729 - 3312240 | 55424.9 |
| u32 family peptidase | JYB84_14620 | P76104 | Negative | 3312298 - 3314226 | 71724.2 |
| cupin domain-containing protein | JYB84_14625 | Not Available | Negative | 3314308 - 3314643 | 12356.6 |
| efflux rnd transporter permease subunit | JYB84_14630 | P94177 | Negative | 3314640 - 3317750 | 113966.0 |
| efflux rnd transporter periplasmic adaptor subunit | JYB84_14635 | B1JSD5 | Negative | 3317760 - 3318830 | 39373.4 |
| efflux rnd transporter periplasmic adaptor subunit | JYB84_14640 | Q7N3E3 | Negative | 3318832 - 3319911 | 38964.1 |
| malate dehydrogenase | JYB84_14645 | A1S3C4 | Negative | 3320076 - 3321011 | 32131.0 |
| transcriptional regulator argr | JYB84_14650 | A0L114 | Positive | 3321295 - 3321765 | 16916.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

