Shewanella cyperi FJAT-53720

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella cyperi FJAT-53720 is a bacterial species notable for its single replicon structure, which is indicated by the presence of only one chromosome. This characteristic may reflect its evolutionary adaptations and functional capabilities. The organism is equipped with flagella, which are crucial for motility, allowing it to navigate its environment effectively. The accession number CP071501.1 provides a reference for genomic information related to Shewanella cyperi FJAT-53720, facilitating further research into its genetic makeup and potential applications. The presence of flagella suggests that this species may be capable of moving towards nutrient sources or away from harmful substances, which is vital for survival in diverse environments. Shewanella species, including Shewanella cyperi, are often associated with aquatic habitats and can play significant roles in biogeochemical cycles, particularly in the reduction of metal ions and organic compounds. Understanding the motility and genomic characteristics of Shewanella cyperi FJAT-53720 may provide insights into its ecological roles, including its potential in bioremediation processes or in studies of microbial interactions in aquatic ecosystems. These traits highlight the importance of this species in both environmental microbiology and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella cyperi
StrainFJAT-53720

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella cyperi FJAT-53720, Complete Genome

Gene Summary

Adenine Count

917007 bp

Thymine Count

918028 bp

Guanine Count

1150670 bp

Cytosine Count

1150658 bp

Genome Length

4136363 bp

Protein-coding Genes

3549 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ubix family flavin prenyltransferaseJYB84_14205Q9KP38Negative3223988 - 322463222879.7
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseJYB84_14210P37773Negative3224663 - 322602748817.4
cytochrome b/b6 domain-containing proteinJYB84_14215Q9X6B2Negative3226217 - 322680722672.9
mtrb/piob family decaheme-associated outer membrane proteinJYB84_14220P0DSN2Negative3226871 - 322893177435.3
dmse family decaheme c-type cytochromeJYB84_14225P0DSN3Negative3228944 - 322986433536.5
hypothetical proteinJYB84_14230P24037Negative3229906 - 323085633979.3
methyl-accepting chemotaxis proteinJYB84_14235Q88N45Negative3230868 - 323250860341.0
na+/h+ antiporter nhac family proteinJYB84_14240O07553Positive3232950 - 323429046393.7
hypothetical proteinJYB84_14245Not AvailablePositive3234353 - 323504225431.7
rrna pseudouridine synthaseJYB84_14250Q8ZGM2Positive3235069 - 323577626573.2

Displaying genes 2841 – 2850 of 3679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.