Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase family protein | JYB84_13305 | Q485R8 | Positive | 3027519 - 3028463 | 34074.7 |
| rna polymerase sigma factor | JYB84_13310 | A0R2D4 | Positive | 3028553 - 3029098 | 20688.8 |
| hypothetical protein | JYB84_13315 | Not Available | Positive | 3029095 - 3029598 | 19056.8 |
| duf4097 family beta strand repeat protein | JYB84_13320 | Not Available | Positive | 3029595 - 3030533 | 33551.6 |
| extracellular solute-binding protein | JYB84_13325 | Not Available | Positive | 3030920 - 3031990 | 39504.0 |
| 16s rrna pseudouridine(516) synthase rsua | JYB84_13330 | Q8ZGM2 | Negative | 3032006 - 3032734 | 26333.9 |
| peptidase m13 | JYB84_13335 | P97739 | Positive | 3032948 - 3035035 | 77172.0 |
| smi1/knr4 family protein | JYB84_13340 | Not Available | Positive | 3035156 - 3035557 | 15393.1 |
| duf4447 family protein | JYB84_13345 | Not Available | Positive | 3035579 - 3036079 | 18622.3 |
| glutathione s-transferase family protein | JYB84_13350 | Q2NL00 | Negative | 3036089 - 3036712 | 23314.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

