Shewanella cyperi FJAT-53720

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella cyperi FJAT-53720 is a bacterial species notable for its single replicon structure, which is indicated by the presence of only one chromosome. This characteristic may reflect its evolutionary adaptations and functional capabilities. The organism is equipped with flagella, which are crucial for motility, allowing it to navigate its environment effectively. The accession number CP071501.1 provides a reference for genomic information related to Shewanella cyperi FJAT-53720, facilitating further research into its genetic makeup and potential applications. The presence of flagella suggests that this species may be capable of moving towards nutrient sources or away from harmful substances, which is vital for survival in diverse environments. Shewanella species, including Shewanella cyperi, are often associated with aquatic habitats and can play significant roles in biogeochemical cycles, particularly in the reduction of metal ions and organic compounds. Understanding the motility and genomic characteristics of Shewanella cyperi FJAT-53720 may provide insights into its ecological roles, including its potential in bioremediation processes or in studies of microbial interactions in aquatic ecosystems. These traits highlight the importance of this species in both environmental microbiology and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella cyperi
StrainFJAT-53720

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella cyperi FJAT-53720, Complete Genome

Gene Summary

Adenine Count

917007 bp

Thymine Count

918028 bp

Guanine Count

1150670 bp

Cytosine Count

1150658 bp

Genome Length

4136363 bp

Protein-coding Genes

3549 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na(+)-translocating nadh-quinone reductase subunit cJYB84_12855A5F5Y7Negative2941372 - 294215728466.2
nadh:ubiquinone reductase (na(+)-transporting) subunit bJYB84_12860Q15YQ5Negative2942150 - 294334943818.8
na(+)-translocating nadh-quinone reductase subunit aJYB84_12865A1S8N5Negative2943349 - 294468347531.3
tonb-dependent receptorJYB84_12870Not AvailableNegative2945070 - 294708874222.6
s-ribosylhomocysteine lyaseJYB84_12875A1S8N7Negative2947237 - 294774618702.6
trap transporter substrate-binding protein dctpJYB84_12880Q8YSQ6Negative2947869 - 294895740074.1
trap transporter large permease subunitJYB84_12885Q9KQS1Negative2948991 - 295036148273.7
trap transporter small permease subunitJYB84_12890Not AvailableNegative2950363 - 295086618640.1
bola/ibag family iron-sulfur metabolism proteinJYB84_12895Q56585Negative2951008 - 295131010897.9
alpha-ketoglutarate-dependent dioxygenase alkbJYB84_12900Q58DM4Negative2951390 - 295205524514.4

Displaying genes 2571 – 2580 of 3679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.