Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | JYB84_12055 | P76576 | Negative | 2772810 - 2773427 | 22124.2 |
| histidine--trna ligase | JYB84_12060 | A1S862 | Negative | 2773470 - 2774744 | 47439.7 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | JYB84_12065 | A1S863 | Negative | 2774858 - 2775973 | 40511.8 |
| duf4115 domain-containing protein | JYB84_12070 | A8GHW6 | Negative | 2776022 - 2777029 | 36352.9 |
| type iv pilus biogenesis/stability protein pilw | JYB84_12075 | Q9HXJ2 | Negative | 2777029 - 2777814 | 29286.9 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | JYB84_12080 | A0KUJ2 | Negative | 2777847 - 2778968 | 41703.5 |
| 5'-nucleotidase c-terminal domain-containing protein | JYB84_12085 | O83142 | Positive | 2779303 - 2780955 | 60243.9 |
| lysr family transcriptional regulator | JYB84_12090 | P76369 | Negative | 2780989 - 2781882 | 32372.2 |
| doxx family protein | JYB84_12095 | P96694 | Positive | 2782029 - 2782472 | 15406.3 |
| pirin family protein | JYB84_12100 | P46852 | Positive | 2782546 - 2783235 | 25218.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

