Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | JYB84_09955 | A1S7A2 | Positive | 2295652 - 2296365 | 26718.2 |
| arginyltransferase | JYB84_09960 | A0KW19 | Positive | 2296352 - 2297065 | 27768.2 |
| translation initiation factor if-1 | JYB84_09965 | A3D5F1 | Positive | 2297178 - 2297396 | 8273.24 |
| atp-dependent clp protease atp-binding subunit clpa | JYB84_09970 | P0ABI1 | Negative | 2297460 - 2299718 | 83152.5 |
| atp-dependent clp protease adapter clps | JYB84_09975 | A1S7A6 | Negative | 2299767 - 2300075 | 11657.2 |
| cold shock domain-containing protein cspd | JYB84_09980 | P0A970 | Positive | 2300271 - 2300477 | 7352.66 |
| nadp-dependent isocitrate dehydrogenase | JYB84_09985 | P16100 | Negative | 2300594 - 2302819 | 80713.3 |
| pseudouridine synthase | JYB84_09990 | P44827 | Positive | 2303032 - 2303835 | 29744.7 |
| nudix hydrolase | JYB84_09995 | A7ZKS4 | Positive | 2303835 - 2304311 | 17365.0 |
| trna 2-thiouridine(34) synthase mnma | JYB84_10000 | A1S7B1 | Positive | 2304456 - 2305568 | 41163.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

