Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtmp kinase | JYB84_09905 | Q8EDX8 | Negative | 2286691 - 2287317 | 22764.4 |
| endolytic transglycosylase mltg | JYB84_09910 | P44720 | Negative | 2287314 - 2288324 | 37343.1 |
| aminodeoxychorismate lyase | JYB84_09915 | P28305 | Negative | 2288321 - 2289136 | 30025.5 |
| dctp deaminase | JYB84_09920 | A1S795 | Negative | 2289139 - 2289723 | 21287.4 |
| uridine kinase | JYB84_09925 | A1S796 | Negative | 2289750 - 2290388 | 24159.4 |
| iron-sulfur cluster carrier protein apbc | JYB84_09930 | Q8ZNN5 | Negative | 2290400 - 2291512 | 38552.7 |
| methionine--trna ligase | JYB84_09935 | A1S798 | Positive | 2291672 - 2293696 | 76250.0 |
| nif3-like dinuclear metal center hexameric protein | JYB84_09940 | Q9KQA7 | Negative | 2293768 - 2294520 | 27522.7 |
| hypothetical protein | JYB84_09945 | Not Available | Positive | 2294709 - 2295071 | 12908.7 |
| glycine zipper 2tm domain-containing protein | JYB84_09950 | P0AB36 | Negative | 2295136 - 2295600 | 16750.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

