Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase nickel incorporation protein hypb | JYB84_09305 | Q7VJB8 | Positive | 2145008 - 2145775 | 28344.8 |
| hypc/hybg/hupf family hydrogenase formation chaperone | JYB84_09310 | Q7VJB9 | Positive | 2145775 - 2146020 | 8943.8 |
| hydrogenase formation protein hypd | JYB84_09315 | P31882 | Positive | 2146013 - 2147140 | 40909.6 |
| hydrogenase expression/formation protein hype | JYB84_09320 | P26412 | Positive | 2147130 - 2148152 | 35898.5 |
| hydrogenase maturation nickel metallochaperone hypa | JYB84_09325 | A6WMK8 | Positive | 2148152 - 2148526 | 13210.9 |
| vrr-nuc domain-containing protein | JYB84_09330 | Q9I2N0 | Negative | 2148504 - 2150156 | 62545.2 |
| peptidylprolyl isomerase | JYB84_09335 | P0A9L7 | Negative | 2150161 - 2150439 | 10332.7 |
| yjbq family protein | JYB84_09340 | P0AF49 | Positive | 2150589 - 2151014 | 15629.7 |
| rsmb/nop family class i sam-dependent rna methyltransferase | JYB84_09345 | P72943 | Negative | 2151034 - 2152248 | 44345.7 |
| sugar mfs transporter | JYB84_09350 | Q2YIJ8 | Negative | 2152408 - 2153649 | 43006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

