Shewanella cyperi FJAT-53720

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella cyperi FJAT-53720 is a bacterial species notable for its single replicon structure, which is indicated by the presence of only one chromosome. This characteristic may reflect its evolutionary adaptations and functional capabilities. The organism is equipped with flagella, which are crucial for motility, allowing it to navigate its environment effectively. The accession number CP071501.1 provides a reference for genomic information related to Shewanella cyperi FJAT-53720, facilitating further research into its genetic makeup and potential applications. The presence of flagella suggests that this species may be capable of moving towards nutrient sources or away from harmful substances, which is vital for survival in diverse environments. Shewanella species, including Shewanella cyperi, are often associated with aquatic habitats and can play significant roles in biogeochemical cycles, particularly in the reduction of metal ions and organic compounds. Understanding the motility and genomic characteristics of Shewanella cyperi FJAT-53720 may provide insights into its ecological roles, including its potential in bioremediation processes or in studies of microbial interactions in aquatic ecosystems. These traits highlight the importance of this species in both environmental microbiology and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella cyperi
StrainFJAT-53720

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella cyperi FJAT-53720, Complete Genome

Gene Summary

Adenine Count

917007 bp

Thymine Count

918028 bp

Guanine Count

1150670 bp

Cytosine Count

1150658 bp

Genome Length

4136363 bp

Protein-coding Genes

3549 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i glyceraldehyde-3-phosphate dehydrogenaseJYB84_08605P50321Negative1993390 - 199440336381.5
duf2989 domain-containing proteinJYB84_08610Not AvailableNegative1994618 - 199544831478.3
glyceraldehyde-3-phosphate dehydrogenaseJYB84_08615Q02PG5Positive1995670 - 199710952700.1
Trna-glyNot AvailableNot AvailablePositive1997301 - 1997376Not Available
Trna-cysNot AvailableNot AvailablePositive1997403 - 1997476Not Available
aspartate/tyrosine/aromatic aminotransferaseJYB84_08630Q56114Positive1997655 - 199884843109.7
uridine diphosphate-n-acetylglucosamine-binding protein yvckJYB84_08635Q9CN20Negative1998895 - 199980032919.1
glucosaminidase domain-containing proteinJYB84_08640P27297Positive2000001 - 200082230819.9
duf2987 domain-containing proteinJYB84_08645Not AvailablePositive2000800 - 200141723114.2
trna 2-thiocytidine(32) synthetase ttcaJYB84_08650A1S6K0Negative2001473 - 200241735572.9

Displaying genes 1721 – 1730 of 3679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.