Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biosynthetic arginine decarboxylase | JYB84_07755 | B8EAI2 | Positive | 1807145 - 1809055 | 71006.7 |
| adenosylmethionine decarboxylase | JYB84_07760 | Q8T1E3 | Positive | 1809127 - 1810056 | 34717.9 |
| agmatinase | JYB84_07765 | A8GIX7 | Positive | 1810088 - 1811017 | 33609.0 |
| pyridoxamine 5'-phosphate oxidase | JYB84_07770 | A1S710 | Positive | 1811140 - 1811778 | 24349.2 |
| cold-shock protein | JYB84_07775 | P72192 | Negative | 1811811 - 1812023 | 7703.19 |
| ycei family protein | JYB84_07780 | Not Available | Positive | 1812191 - 1812781 | 20885.5 |
| duf3802 family protein | JYB84_07785 | Not Available | Positive | 1812870 - 1813223 | 13120.8 |
| hypothetical protein | JYB84_07790 | Not Available | Positive | 1813322 - 1813654 | 13133.9 |
| stas/sec14 domain-containing protein | JYB84_07795 | Not Available | Positive | 1813682 - 1814053 | 13537.4 |
| pas domain-containing protein | JYB84_07800 | P55552 | Negative | 1814063 - 1816495 | 90950.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

