Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | JYB84_06255 | A1S4X2 | Positive | 1489257 - 1490636 | 51866.3 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | JYB84_06260 | A1S4X3 | Negative | 1490730 - 1491584 | 30529.9 |
| Trna-pro | Not Available | Not Available | Positive | 1491885 - 1491961 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1492026 - 1492102 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 1492114 - 1492189 | Not Available |
| trigger factor | JYB84_06280 | Q0HHA0 | Positive | 1492443 - 1493747 | 47669.8 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | JYB84_06285 | Q12LA1 | Positive | 1493837 - 1494445 | 22293.2 |
| atp-dependent protease atp-binding subunit clpx | JYB84_06290 | A1S4X6 | Positive | 1494530 - 1495807 | 46373.7 |
| endopeptidase la | JYB84_06295 | P0A9M1 | Positive | 1495940 - 1498297 | 87594.4 |
| hu family dna-binding protein | JYB84_06300 | P0A1R9 | Positive | 1498554 - 1498826 | 9432.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

