Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | JYB84_05055 | P45008 | Negative | 1182051 - 1182482 | 16192.2 |
| ph domain-containing protein | JYB84_05060 | Not Available | Negative | 1182611 - 1183174 | 22047.7 |
| is3 family transposase | JYB84_05065 | Q47718 | Negative | 1184162 - 1185324 | 45138.1 |
| tetr/acrr family transcriptional regulator | JYB84_05070 | P75952 | Negative | 1186445 - 1187131 | 24600.3 |
| efflux rnd transporter periplasmic adaptor subunit | JYB84_05075 | Q8FWV8 | Positive | 1187535 - 1188893 | 48643.0 |
| multidrug efflux rnd transporter permease subunit | JYB84_05080 | Q8G2M6 | Positive | 1188917 - 1192078 | 113712.0 |
| acyloxyacyl hydrolase | JYB84_05085 | Not Available | Positive | 1192300 - 1192830 | 19382.0 |
| isocitrate dehydrogenase | JYB84_05090 | Q945K7 | Negative | 1192907 - 1193914 | 35965.3 |
| s9 family peptidase | JYB84_05095 | P39839 | Positive | 1194157 - 1197018 | 106126.0 |
| duf3192 domain-containing protein | JYB84_05100 | Not Available | Negative | 1197097 - 1197489 | 14553.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

