Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella cyperi |
| Strain | FJAT-53720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
917007 bp
Thymine Count
918028 bp
Guanine Count
1150670 bp
Cytosine Count
1150658 bp
Genome Length
4136363 bp
Protein-coding Genes
3549 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | JYB84_04955 | P25888 | Positive | 1162391 - 1163809 | 50634.4 |
| gtp-binding protein | JYB84_04960 | P33030 | Positive | 1163885 - 1164907 | 36943.6 |
| mate family efflux transporter | JYB84_04965 | Q49VC5 | Positive | 1164998 - 1166335 | 48478.6 |
| nad(+) kinase | JYB84_04970 | A3D2B0 | Negative | 1166364 - 1167242 | 31802.3 |
| nucleotide exchange factor grpe | JYB84_04975 | A1S8D5 | Positive | 1167341 - 1167940 | 21747.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | JYB84_04980 | A0KZA9 | Negative | 1168286 - 1170151 | 67809.0 |
| (2e,6e)-farnesyl diphosphate synthase | JYB84_04985 | P45204 | Negative | 1170175 - 1171056 | 31207.6 |
| exodeoxyribonuclease vii small subunit | JYB84_04990 | A7MYC1 | Negative | 1171057 - 1171296 | 8766.41 |
| flagellar motor protein poma | JYB84_04995 | O06873 | Positive | 1171572 - 1172339 | 27423.1 |
| flagellar motor protein motb | JYB84_05000 | P46827 | Positive | 1172344 - 1173270 | 33466.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

