Porphyromonas endodontalis HG370

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas endodontalis HG370 is a Gram-negative, anaerobic rod-shaped bacterium. This species is characterized by the presence of flagella, which may play a role in its motility within anaerobic environments. The organism has one replicon, indicating a single circular chromosome. As an anaerobe, P. endodontalis thrives in environments lacking oxygen, which is typical for many microbes found in the human oral cavity and root canal systems. This ecological niche is significant, as P. endodontalis is often implicated in endodontic infections and may contribute to the pathogenesis of periodontal diseases. The genetic sequence of P. endodontalis is cataloged under the accession number CP083629.1, providing a resource for further studies into its genomic features and potential virulence factors. Understanding the genomic characteristics of this bacterium can offer insights into its metabolic pathways and interactions with host tissues. In summary, Porphyromonas endodontalis HG370 exemplifies a specialized anaerobic organism adapted to the unique conditions of the human oral microbiome. Its role in dental health and disease underscores the importance of studying such bacteria to develop effective treatments for oral infections.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas endodontalis
StrainHG370

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Porphyromonas endodontalis HG370
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman oral microbiome; root canals; sub- and supragingival plaque; subgingival plaque; supra- and sub-gingival plaque; tonsils
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas endodontalis HG370, Complete Genome

Gene Summary

Adenine Count

549935 bp

Thymine Count

553566 bp

Guanine Count

502543 bp

Cytosine Count

496886 bp

Genome Length

2102930 bp

Protein-coding Genes

1703 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c69 family dipeptidaseLA319_00165Q48841Negative45001 - 4666261915.4
hypothetical proteinLA319_00170Not AvailableNegative46770 - 4739323474.3
c10 family peptidaseLA319_00175P0DD38Negative47406 - 4822130732.6
spi family protease inhibitorLA319_00180Not AvailableNegative48166 - 4874720811.6
rna methyltransferaseLA319_00185Q8EAG8Negative48985 - 4953320118.3
gliding motility-associated c-terminal domain-containing proteinLA319_00190Not AvailableNegative49666 - 5102149882.7
2-oxoacid:acceptor oxidoreductase family proteinLA319_00195O26801Negative51160 - 5170519709.2
2-oxoglutarate oxidoreductaseLA319_00200P80907Negative51724 - 5251828767.6
hypothetical proteinLA319_00205Not AvailableNegative52532 - 527237401.37
3-methyl-2-oxobutanoate dehydrogenase subunit vorbLA319_00210P80908Negative52895 - 5398039302.4

Displaying genes 41 – 50 of 1769 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Periapical lesionsCausesPMC4262410

Displaying health effects 1 – 1 of 1 in total