Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas endodontalis |
| Strain | HG370 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human oral microbiome; root canals; sub- and supragingival plaque; subgingival plaque; supra- and sub-gingival plaque; tonsils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
549935 bp
Thymine Count
553566 bp
Guanine Count
502543 bp
Cytosine Count
496886 bp
Genome Length
2102930 bp
Protein-coding Genes
1703 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor-1/ycca family protein | LA319_01610 | P0AAC5 | Negative | 374112 - 374858 | 27468.6 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | LA319_01615 | Q8AAB1 | Negative | 374883 - 376733 | 67965.4 |
| c40 family peptidase | LA319_01620 | P96740 | Negative | 377031 - 377780 | 27555.0 |
| ribonuclease z | LA319_01625 | Q51834 | Negative | 377791 - 378705 | 34011.7 |
| crispr-associated helicase cas3' | LA319_01630 | D4GQN8 | Positive | 378946 - 381234 | 87345.4 |
| type i-c crispr-associated protein cas5c | LA319_01635 | Q65TW5 | Positive | 381254 - 381934 | 26596.0 |
| type i-c crispr-associated protein cas8c/csd1 | LA319_01640 | Not Available | Positive | 381931 - 383814 | 70278.0 |
| type i-c crispr-associated protein cas7/csd2 | LA319_01645 | D4GQN6 | Positive | 383854 - 384723 | 32203.1 |
| crispr-associated protein cas4 | LA319_01650 | Q8F1F5 | Positive | 384733 - 385407 | 25748.6 |
| type i-c crispr-associated endonuclease cas1c | LA319_01655 | Q8KDC4 | Positive | 385418 - 386446 | 39184.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

