Porphyromonas endodontalis HG370

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas endodontalis HG370 is a Gram-negative, anaerobic rod-shaped bacterium. This species is characterized by the presence of flagella, which may play a role in its motility within anaerobic environments. The organism has one replicon, indicating a single circular chromosome. As an anaerobe, P. endodontalis thrives in environments lacking oxygen, which is typical for many microbes found in the human oral cavity and root canal systems. This ecological niche is significant, as P. endodontalis is often implicated in endodontic infections and may contribute to the pathogenesis of periodontal diseases. The genetic sequence of P. endodontalis is cataloged under the accession number CP083629.1, providing a resource for further studies into its genomic features and potential virulence factors. Understanding the genomic characteristics of this bacterium can offer insights into its metabolic pathways and interactions with host tissues. In summary, Porphyromonas endodontalis HG370 exemplifies a specialized anaerobic organism adapted to the unique conditions of the human oral microbiome. Its role in dental health and disease underscores the importance of studying such bacteria to develop effective treatments for oral infections.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas endodontalis
StrainHG370

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Porphyromonas endodontalis HG370
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman oral microbiome; root canals; sub- and supragingival plaque; subgingival plaque; supra- and sub-gingival plaque; tonsils
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas endodontalis HG370, Complete Genome

Gene Summary

Adenine Count

549935 bp

Thymine Count

553566 bp

Guanine Count

502543 bp

Cytosine Count

496886 bp

Genome Length

2102930 bp

Protein-coding Genes

1703 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunitLA319_06260P20054Positive1478548 - 1481775119696.0
methyltransferaseLA319_06265Q7MVG0Positive1481805 - 148257528441.2
iron-containing alcohol dehydrogenaseLA319_06270Q46856Positive1482877 - 148402842319.6
zinc-dependent metalloproteaseLA319_06275Not AvailablePositive1484110 - 148665996198.1
superoxide dismutaseLA319_06280P19665Positive1486822 - 148740321575.4
duf721 domain-containing proteinLA319_06285Not AvailableNegative1487580 - 148787011543.0
dna replication and repair protein recfLA319_06290Q7MX24Negative1487887 - 148900542742.3
4-hydroxy-tetrahydrodipicolinate synthaseLA319_06295B2RMB9Negative1489017 - 148992833167.9
hypothetical proteinLA319_06300Not AvailablePositive1490288 - 149131338714.5
hypothetical proteinLA319_06305Not AvailablePositive1491589 - 149243432254.0

Displaying genes 1251 – 1260 of 1769 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Periapical lesionsCausesPMC4262410

Displaying health effects 1 – 1 of 1 in total