Porphyromonas endodontalis HG370

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas endodontalis HG370 is a Gram-negative, anaerobic rod-shaped bacterium. This species is characterized by the presence of flagella, which may play a role in its motility within anaerobic environments. The organism has one replicon, indicating a single circular chromosome. As an anaerobe, P. endodontalis thrives in environments lacking oxygen, which is typical for many microbes found in the human oral cavity and root canal systems. This ecological niche is significant, as P. endodontalis is often implicated in endodontic infections and may contribute to the pathogenesis of periodontal diseases. The genetic sequence of P. endodontalis is cataloged under the accession number CP083629.1, providing a resource for further studies into its genomic features and potential virulence factors. Understanding the genomic characteristics of this bacterium can offer insights into its metabolic pathways and interactions with host tissues. In summary, Porphyromonas endodontalis HG370 exemplifies a specialized anaerobic organism adapted to the unique conditions of the human oral microbiome. Its role in dental health and disease underscores the importance of studying such bacteria to develop effective treatments for oral infections.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas endodontalis
StrainHG370

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Porphyromonas endodontalis HG370
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman oral microbiome; root canals; sub- and supragingival plaque; subgingival plaque; supra- and sub-gingival plaque; tonsils
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas endodontalis HG370, Complete Genome

Gene Summary

Adenine Count

549935 bp

Thymine Count

553566 bp

Guanine Count

502543 bp

Cytosine Count

496886 bp

Genome Length

2102930 bp

Protein-coding Genes

1703 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemaseLA319_06210B8J2K3Negative1462100 - 146458393424.3
Trna-argNot AvailableNot AvailablePositive1465077 - 1465150Not Available
atp-dependent helicaseLA319_06220Q9S3Q0Negative1465197 - 146762691210.5
swim zinc finger domain-containing proteinLA319_06225Not AvailableNegative1467623 - 146899353563.5
long-chain fatty acid--coa ligaseLA319_06230P44446Negative1469141 - 147096169360.5
Trna-alaNot AvailableNot AvailablePositive1471256 - 1471332Not Available
ctp synthaseLA319_06240B2RKS1Positive1471920 - 147353660061.3
membrane protein insertase yidcLA319_06245P60036Positive1473609 - 147547170637.7
amidophosphoribosyltransferaseLA319_06250Q9L6B8Positive1475496 - 147738871627.0
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitLA319_06255P07258Positive1477390 - 147845739484.7

Displaying genes 1241 – 1250 of 1769 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Periapical lesionsCausesPMC4262410

Displaying health effects 1 – 1 of 1 in total