Porphyromonas endodontalis HG370

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas endodontalis HG370 is a Gram-negative, anaerobic rod-shaped bacterium. This species is characterized by the presence of flagella, which may play a role in its motility within anaerobic environments. The organism has one replicon, indicating a single circular chromosome. As an anaerobe, P. endodontalis thrives in environments lacking oxygen, which is typical for many microbes found in the human oral cavity and root canal systems. This ecological niche is significant, as P. endodontalis is often implicated in endodontic infections and may contribute to the pathogenesis of periodontal diseases. The genetic sequence of P. endodontalis is cataloged under the accession number CP083629.1, providing a resource for further studies into its genomic features and potential virulence factors. Understanding the genomic characteristics of this bacterium can offer insights into its metabolic pathways and interactions with host tissues. In summary, Porphyromonas endodontalis HG370 exemplifies a specialized anaerobic organism adapted to the unique conditions of the human oral microbiome. Its role in dental health and disease underscores the importance of studying such bacteria to develop effective treatments for oral infections.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas endodontalis
StrainHG370

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Porphyromonas endodontalis HG370
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman oral microbiome; root canals; sub- and supragingival plaque; subgingival plaque; supra- and sub-gingival plaque; tonsils
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas endodontalis HG370, Complete Genome

Gene Summary

Adenine Count

549935 bp

Thymine Count

553566 bp

Guanine Count

502543 bp

Cytosine Count

496886 bp

Genome Length

2102930 bp

Protein-coding Genes

1703 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4365 domain-containing proteinLA319_05260Not AvailableNegative1234354 - 123612967626.5
duf5715 family proteinLA319_05265Not AvailableNegative1236358 - 123764148426.0
phospho-sugar mutaseLA319_05270P18159Negative1237687 - 123943564833.6
Trna-thrNot AvailableNot AvailablePositive1239581 - 1239653Not Available
hypothetical proteinLA319_05280Not AvailableNegative1239744 - 124019917607.5
valine--trna ligaseLA319_05285Q7MVD7Negative1240242 - 124286399359.5
hdig domain-containing proteinLA319_05290P46344Positive1242992 - 124511881161.3
shikimate kinaseLA319_05295A6LFQ8Positive1245115 - 124565420394.7
thiol protease/hemagglutinin prttLA319_05300P43158Negative1245743 - 124842199767.8
hypothetical proteinLA319_05305Not AvailablePositive1248680 - 124990346063.3

Displaying genes 1051 – 1060 of 1769 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Periapical lesionsCausesPMC4262410

Displaying health effects 1 – 1 of 1 in total