Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium uptake protein trka | PSDVSF_08350 | P39760 | Negative | 849340 - 849999 | 24280.4 |
| potassium transporter trkh | PSDVSF_08360 | O32081 | Negative | 850018 - 851382 | 49080.5 |
| shikimate kinase | PSDVSF_08370 | Q7N7B0 | Negative | 851430 - 851999 | 20394.5 |
| hypothetical protein | PSDVSF_08380 | P00210 | Positive | 852146 - 852337 | 7176.55 |
| hypothetical protein | PSDVSF_08390 | Not Available | Negative | 852402 - 852974 | 21355.7 |
| hypothetical protein | PSDVSF_08400 | Not Available | Negative | 853078 - 853587 | 18624.1 |
| abc transporter | PSDVSF_08410 | Q54IH6 | Negative | 853611 - 854918 | 49740.9 |
| hypothetical protein | PSDVSF_08420 | P94548 | Negative | 854902 - 855642 | 28179.8 |
| hypothetical protein | PSDVSF_08430 | Not Available | Positive | 855776 - 856288 | 19824.9 |
| nadh-quinone oxidoreductase subunit n | PSDVSF_08440 | C4XGW8 | Negative | 856363 - 857820 | 52173.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
