Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase | PSDVSF_08250 | P14407 | Negative | 839136 - 839687 | 19575.4 |
| fumarate hydratase | PSDVSF_08260 | Q58690 | Negative | 839687 - 840526 | 29956.3 |
| hypothetical protein | PSDVSF_08270 | Not Available | Positive | 840618 - 840758 | 5115.14 |
| fumarate reductase iron-sulfur subunit | PSDVSF_08280 | P17596 | Negative | 840767 - 841504 | 27965.8 |
| fumarate reductase flavoprotein subunit | PSDVSF_08290 | P17412 | Negative | 841508 - 843343 | 66568.2 |
| fumarate reductase | PSDVSF_08300 | O06912 | Negative | 843357 - 844007 | 24324.7 |
| peptidase m16 | PSDVSF_08310 | Q04805 | Positive | 844444 - 847161 | 100515.0 |
| hypothetical protein | PSDVSF_08320 | A1SRX7 | Positive | 847319 - 847654 | 12504.2 |
| membrane protein | PSDVSF_08330 | P39270 | Positive | 847658 - 848269 | 23165.1 |
| chorismate synthase | PSDVSF_08340 | C6C0I6 | Negative | 848266 - 849330 | 37976.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
