Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetyl glucosamine 2-epimerase | PSDVSF_07850 | Q47400 | Positive | 799226 - 800410 | 42098.5 |
| alcohol dehydrogenase | PSDVSF_07860 | Q6CCU3 | Positive | 800416 - 801489 | 40239.4 |
| hypothetical protein | PSDVSF_07870 | Not Available | Positive | 801483 - 802385 | 33248.3 |
| acylneuraminate cytidylyltransferase | PSDVSF_07880 | Q45982 | Positive | 802385 - 803065 | 24999.0 |
| short-chain dehydrogenase | PSDVSF_07890 | Q8KWT4 | Positive | 803062 - 803865 | 28249.7 |
| hypothetical protein | PSDVSF_07900 | Not Available | Negative | 803949 - 804074 | 4739.0 |
| hypothetical protein | PSDVSF_07910 | Q8R885 | Positive | 804129 - 804746 | 22096.2 |
| imidazole glycerol phosphate synthase subunit hish | PSDVSF_07920 | Q2RGW0 | Positive | 804739 - 805410 | 24120.6 |
| lps biosynthesis protein psea | PSDVSF_07930 | Not Available | Positive | 805411 - 806625 | 46979.5 |
| hypothetical protein | PSDVSF_07940 | Not Available | Positive | 806639 - 807982 | 50215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
