Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | PSDVSF_07550 | A6VKQ4 | Positive | 764969 - 765739 | 28129.3 |
| transketolase | PSDVSF_07560 | P46375 | Positive | 765732 - 766598 | 31993.3 |
| abc transporter atp-binding protein | PSDVSF_07570 | Q6AJW3 | Positive | 766806 - 768587 | 65992.9 |
| peptidase | PSDVSF_07580 | Not Available | Positive | 768591 - 769169 | 22663.4 |
| pyridine nucleotide-disulfide oxidoreductase | PSDVSF_07590 | D7AF64 | Negative | 769226 - 771556 | 84972.2 |
| glutamate synthase | PSDVSF_07600 | O29309 | Negative | 771587 - 773221 | 59369.0 |
| hypothetical protein | PSDVSF_07610 | Not Available | Negative | 773185 - 774321 | 42343.0 |
| hypothetical protein | PSDVSF_07620 | P51716 | Negative | 774686 - 775087 | 14910.9 |
| transglycosylase | PSDVSF_07630 | Q9KPQ4 | Negative | 775104 - 776324 | 45131.4 |
| ai-2e family transporter | PSDVSF_07640 | P9WFM2 | Negative | 776327 - 777442 | 41412.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
