Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 721620 - 721694 | Not Available |
| rna polymerase-binding transcription factor dksa | PSDVSF_07070 | P0CAU3 | Positive | 721922 - 722284 | 13707.1 |
| hypothetical protein | PSDVSF_07080 | D4FWG0 | Positive | 722312 - 723841 | 57596.5 |
| hypothetical protein | PSDVSF_07090 | Q9KN42 | Negative | 723931 - 724926 | 35464.2 |
| a/g-specific adenine glycosylase | PSDVSF_07100 | P83847 | Negative | 725038 - 726126 | 41216.5 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | PSDVSF_07110 | B4S616 | Negative | 726140 - 726886 | 28134.2 |
| hypothetical protein | PSDVSF_07120 | Not Available | Negative | 726966 - 729623 | 102312.0 |
| glycosyl transferase | PSDVSF_07130 | Q4UM29 | Negative | 729698 - 730558 | 32559.9 |
| hypothetical protein | PSDVSF_07140 | Not Available | Negative | 730694 - 730837 | 5335.36 |
| hypothetical protein | PSDVSF_07150 | Not Available | Negative | 730844 - 731266 | 15326.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
