Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthetic protein flir | PSDVSF_06410 | P35537 | Positive | 661477 - 662265 | 28834.8 |
| flagellar biosynthesis protein flhb | PSDVSF_06420 | P35538 | Positive | 662275 - 663342 | 40273.1 |
| flagellar biosynthesis protein flha | PSDVSF_06430 | P35620 | Positive | 663409 - 665508 | 75661.8 |
| flagellar biosynthesis protein flhf | PSDVSF_06440 | O67266 | Positive | 665518 - 666591 | 39612.0 |
| site-determining protein | PSDVSF_06450 | G3XD64 | Positive | 666609 - 667436 | 30288.8 |
| rna polymerase sigma factor | PSDVSF_06460 | P0AEM8 | Positive | 667378 - 668163 | 30082.0 |
| response regulator | PSDVSF_06470 | Q51455 | Positive | 668185 - 668565 | 14378.3 |
| hypothetical protein | PSDVSF_06480 | Not Available | Positive | 668596 - 669303 | 26812.8 |
| hypothetical protein | PSDVSF_06490 | Not Available | Positive | 669307 - 669636 | 12158.3 |
| hypothetical protein | PSDVSF_06500 | Not Available | Positive | 669665 - 670072 | 15448.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
