Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudodesulfovibrio sediminis SF6
Accession NumberAP024485.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Gpo family capsid scaffolding protein | PSDVSF_32190 | P51719 | - | 3443247 - 3444080 | 30646.4 |
| Putative terminase atpase subunit | PSDVSF_32200 | P51718 | + | 3444247 - 3446007 | 67751.4 |
| Portal protein | PSDVSF_32210 | P25480 | + | 3446026 - 3447006 | 37086.4 |
| Hypothetical protein | PSDVSF_32220 | Not Available | + | 3447028 - 3447285 | 9497.39 |
| chromosomal replication initiator protein dnaa | PSDVSF_00010 | B8DN19 | + | 101 - 1495 | 52666.0 |
| n-methylhydantoinase b | PSDVSF_00020 | Q8K010 | - | 1659 - 3242 | 56135.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | PSDVSF_00030 | Q7CQE0 | - | 3261 - 4049 | 27509.2 |
| zinc metalloprotease | PSDVSF_00040 | Q98MC1 | - | 4027 - 5085 | 38064.5 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | PSDVSF_00050 | Q313H2 | - | 5158 - 6360 | 42736.3 |
| phosphatidate cytidylyltransferase | PSDVSF_00060 | Q49X46 | - | 6381 - 7190 | 29509.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.