Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_05600 | Not Available | Negative | 586064 - 586576 | 18870.9 |
| omp85 family outer membrane protein | PSDVSF_05610 | Q729H8 | Negative | 586611 - 589322 | 99829.4 |
| lipoprotein-releasing system atp-binding protein lold | PSDVSF_05620 | Q729H7 | Negative | 589312 - 589995 | 24727.9 |
| abc transporter permease | PSDVSF_05630 | P57061 | Negative | 589988 - 591217 | 44036.4 |
| lysyl-trna synthetase | PSDVSF_05640 | A5D5Q4 | Negative | 591241 - 592824 | 60353.6 |
| Trna-asn | Not Available | Not Available | Positive | 593048 - 593123 | Not Available |
| hypothetical protein | PSDVSF_05650 | Not Available | Negative | 593688 - 594122 | 16409.0 |
| hypothetical protein | PSDVSF_05660 | Not Available | Negative | 594131 - 595537 | 49427.2 |
| hypothetical protein | PSDVSF_05670 | Q858F5 | Negative | 595534 - 596442 | 32035.6 |
| hypothetical protein | PSDVSF_05680 | Not Available | Negative | 596442 - 599108 | 100612.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
