Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | PSDVSF_05200 | P77434 | Positive | 549158 - 550369 | 45025.2 |
| homoserine dehydrogenase | PSDVSF_05210 | P29365 | Positive | 550373 - 551671 | 46467.3 |
| putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | PSDVSF_05220 | Q74C57 | Positive | 551681 - 552877 | 43556.7 |
| thioesterase | PSDVSF_05230 | O67466 | Positive | 552877 - 553296 | 16248.4 |
| amidohydrolase | PSDVSF_05240 | Not Available | Positive | 553381 - 554166 | 29414.2 |
| hypothetical protein | PSDVSF_05250 | P65293 | Positive | 554256 - 554480 | 8434.24 |
| branched chain amino acid abc transporter atp-binding protein | PSDVSF_05260 | A2RKA7 | Negative | 554537 - 556072 | 56250.6 |
| abc transporter permease | PSDVSF_05270 | D4GPW1 | Negative | 556078 - 556995 | 32516.7 |
| abc transporter permease | PSDVSF_05280 | D4GPW2 | Negative | 557000 - 558061 | 38725.9 |
| bmp family abc transporter substrate-binding protein | PSDVSF_05290 | Q2YKI6 | Negative | 558074 - 559213 | 40927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
