Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | PSDVSF_04810 | B2IKV6 | Positive | 504507 - 504782 | 10342.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PSDVSF_04820 | C6BSH4 | Positive | 505687 - 506571 | 31393.2 |
| manganese-dependent inorganic pyrophosphatase | PSDVSF_04830 | O29502 | Negative | 506803 - 507723 | 32797.6 |
| pts sugar transporter subunit iibc | PSDVSF_04840 | P42909 | Negative | 508519 - 508983 | 16938.1 |
| pts sugar transporter subunit iia | PSDVSF_04850 | P69799 | Negative | 508994 - 509431 | 14988.4 |
| nucleotide-binding protein | PSDVSF_04860 | Q310S5 | Negative | 509435 - 510316 | 32917.9 |
| pts fructose transporter subunit iia | PSDVSF_04870 | P30335 | Negative | 510335 - 510784 | 16450.0 |
| ribose abc transporter permease | PSDVSF_04880 | Q5XAQ7 | Negative | 510787 - 511329 | 20518.5 |
| rna polymerase sigma-54 factor | PSDVSF_04890 | P26979 | Negative | 511370 - 512779 | 53764.2 |
| abc transporter atp-binding protein | PSDVSF_04900 | P45073 | Negative | 512995 - 513720 | 26682.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
