Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobd | PSDVSF_04610 | Q39YE5 | Negative | 483582 - 484529 | 34714.9 |
| rna polymerase sigma factor rpod | PSDVSF_04620 | P17531 | Negative | 484580 - 486322 | 66997.5 |
| dna primase | PSDVSF_04630 | P33655 | Negative | 486309 - 488057 | 65345.8 |
| endonuclease muts2 | PSDVSF_04640 | C6BSW8 | Negative | 488074 - 490368 | 85287.4 |
| aspartyl-trna amidotransferase subunit b | PSDVSF_04650 | P54464 | Negative | 490392 - 490838 | 16325.7 |
| hypothetical protein | PSDVSF_04660 | C6BSW6 | Negative | 490841 - 491041 | 7925.92 |
| hypothetical protein | PSDVSF_04670 | Not Available | Negative | 491222 - 491395 | 6371.97 |
| dna-binding protein | PSDVSF_04680 | Q9KQS9 | Negative | 491410 - 491682 | 9665.95 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6)) - dimethyltransferase | PSDVSF_04690 | C6BSW3 | Negative | 491956 - 492735 | 29274.2 |
| adenine phosphoribosyltransferase | PSDVSF_04700 | C6BSW0 | Positive | 492850 - 493371 | 18919.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
