Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridine nucleotide-disulfide oxidoreductase | PSDVSF_04410 | P42435 | Negative | 463817 - 465103 | 46207.5 |
| 4fe-4s ferredoxin | PSDVSF_04420 | P56256 | Negative | 465114 - 465560 | 16517.9 |
| glutamate synthase | PSDVSF_04430 | O29309 | Negative | 465573 - 467102 | 55075.7 |
| hypothetical protein | PSDVSF_04440 | Not Available | Negative | 467296 - 467481 | 6941.7 |
| sodium:solute symporter | PSDVSF_04450 | P94392 | Positive | 467705 - 469312 | 58561.6 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | PSDVSF_04460 | B8FQZ6 | Positive | 469439 - 469897 | 16494.8 |
| acetylornithine aminotransferase | PSDVSF_04470 | Q58131 | Positive | 469915 - 471132 | 43738.9 |
| hypothetical protein | PSDVSF_04480 | Not Available | Positive | 471178 - 471393 | 7767.03 |
| 50s ribosomal protein l11 methyltransferase | PSDVSF_04490 | A9WD89 | Positive | 471482 - 472345 | 30888.8 |
| endonuclease iii | PSDVSF_04500 | Q58829 | Positive | 472354 - 473004 | 24583.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
