Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c assembly protein | PSDVSF_04310 | A9BAR6 | Positive | 454196 - 455008 | 30361.1 |
| glutamyl-trna reductase | PSDVSF_04320 | C6BV55 | Positive | 455005 - 456378 | 50915.6 |
| hypothetical protein | PSDVSF_04330 | Not Available | Positive | 456378 - 456725 | 13674.4 |
| trna(ile)-lysidine synthase | PSDVSF_04340 | Q72C25 | Positive | 456727 - 457737 | 37654.1 |
| adenylate kinase | PSDVSF_04350 | C6BV58 | Positive | 457833 - 458501 | 24525.1 |
| protein-export membrane protein secf | PSDVSF_04360 | E4TJ19 | Negative | 458747 - 459817 | 38195.1 |
| protein translocase subunit secd | PSDVSF_04370 | A0LHM9 | Negative | 459828 - 461423 | 57535.7 |
| preprotein translocase subunit yajc | PSDVSF_04380 | O67295 | Negative | 461548 - 461898 | 12099.1 |
| hypothetical protein | PSDVSF_04390 | Q58745 | Negative | 461946 - 462707 | 27699.4 |
| hypothetical protein | PSDVSF_04400 | Q9WYM9 | Negative | 462708 - 463805 | 41562.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
