Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_04210 | Not Available | Positive | 442877 - 443230 | 13457.5 |
| hypothetical protein | PSDVSF_04220 | P0AB60 | Positive | 443239 - 444390 | 43775.3 |
| dna mismatch repair protein muts | PSDVSF_04230 | Q30ZX3 | Positive | 444410 - 447040 | 98915.4 |
| hypothetical protein | PSDVSF_04240 | Not Available | Positive | 447045 - 447491 | 16439.8 |
| diaminopimelate decarboxylase | PSDVSF_04250 | P44316 | Positive | 447589 - 448827 | 45835.9 |
| ribosomal rna small subunit methyltransferase e | PSDVSF_04260 | P54461 | Positive | 448969 - 449613 | 23316.0 |
| recombinase rara | PSDVSF_04270 | P39918 | Positive | 449613 - 450836 | 45515.8 |
| cgeb family protein | PSDVSF_04280 | P42090 | Negative | 450897 - 452177 | 48539.1 |
| heptosyltransferase | PSDVSF_04290 | P37692 | Negative | 452182 - 453429 | 45648.9 |
| siroheme synthase | PSDVSF_04300 | Q6CZS0 | Positive | 453532 - 454209 | 24659.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
