Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex | PSDVSF_04110 | O31550 | Negative | 427787 - 429124 | 47113.7 |
| sigma-54-dependent fis family transcriptional regulator | PSDVSF_04120 | P26047 | Positive | 429700 - 431511 | 66499.8 |
| rna-binding transcriptional accessory protein | PSDVSF_04130 | Q51152 | Negative | 431618 - 433750 | 77937.5 |
| hypothetical protein | PSDVSF_04140 | Not Available | Negative | 433923 - 436019 | 79477.0 |
| hypothetical protein | PSDVSF_04150 | Not Available | Negative | 436455 - 436733 | 10573.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | PSDVSF_04160 | P71512 | Negative | 436758 - 437153 | 14822.7 |
| ll-diaminopimelate aminotransferase | PSDVSF_04170 | C6BUK3 | Negative | 437258 - 438424 | 42554.6 |
| tyrosine recombinase xerc | PSDVSF_04180 | Q5HP53 | Positive | 438690 - 439556 | 33123.4 |
| poly(a) polymerase | PSDVSF_04190 | Q74CU0 | Positive | 439578 - 442256 | 100940.0 |
| hydrolase | PSDVSF_04200 | P9WMK8 | Positive | 442377 - 442865 | 18476.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
