Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase | PSDVSF_03930 | P74158 | Positive | 410705 - 411496 | 28240.8 |
| hypothetical protein | PSDVSF_03940 | Q6D3F5 | Negative | 411493 - 412032 | 20539.7 |
| ribosomal-protein-alanine acetyltransferase | PSDVSF_03950 | O05517 | Positive | 412131 - 412583 | 17431.1 |
| phosphoglycerate kinase | PSDVSF_03960 | C6BUI7 | Positive | 412604 - 413806 | 42364.2 |
| triosephosphate isomerase | PSDVSF_03970 | B8DJI3 | Positive | 413803 - 414555 | 26940.2 |
| preprotein translocase subunit secg | PSDVSF_03980 | P0AGA1 | Positive | 414596 - 414943 | 11506.1 |
| Trna-leu | Not Available | Not Available | Positive | 414960 - 415046 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 415343 - 415429 | Not Available |
| formate dehydrogenase 2 subunit alpha (cytochrome c-553) | PSDVSF_03990 | Q727P3 | Positive | 416015 - 419059 | 113704.0 |
| formate dehydrogenase 2 subunit beta (cytochrome c-553) | PSDVSF_04000 | Q727P4 | Positive | 419075 - 419809 | 27753.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
