Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_03170 | Not Available | Negative | 330315 - 330833 | 19796.9 |
| (fe-s)-binding protein | PSDVSF_03180 | Q57563 | Negative | 330851 - 331294 | 16556.2 |
| hypothetical protein | PSDVSF_03190 | Not Available | Negative | 331341 - 332261 | 34482.2 |
| lipoprotein signal peptidase | PSDVSF_03200 | C6BV90 | Negative | 332508 - 332993 | 17767.8 |
| isoleucine--trna ligase | PSDVSF_03210 | C6BV89 | Negative | 333001 - 335817 | 107376.0 |
| hypothetical protein | PSDVSF_03220 | Q9I3M9 | Positive | 336030 - 336665 | 23461.1 |
| serine acetyltransferase | PSDVSF_03230 | Q59967 | Negative | 336732 - 337652 | 33430.1 |
| cysteine synthase | PSDVSF_03240 | Q7DDL5 | Negative | 337663 - 338583 | 32220.2 |
| cysteine desulfurase nifs | PSDVSF_03250 | P05341 | Negative | 338608 - 339786 | 42884.1 |
| nitrogen fixation protein nifu | PSDVSF_03260 | Q43885 | Negative | 339788 - 340645 | 30613.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
