Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | PSDVSF_03070 | O30082 | Positive | 320347 - 321138 | 27771.9 |
| cupin | PSDVSF_03080 | Not Available | Positive | 321149 - 321466 | 11513.9 |
| hypothetical protein | PSDVSF_03090 | Q05805 | Positive | 321468 - 322133 | 23916.9 |
| sulfite reductase, assimilatory-type | PSDVSF_03100 | Q05805 | Positive | 322158 - 322817 | 23755.2 |
| trk system potassium transport protein trka | PSDVSF_03110 | E1V6C6 | Positive | 322977 - 324347 | 50468.4 |
| trk system potassium transporter trkh | PSDVSF_03120 | P0AFZ8 | Positive | 324348 - 325805 | 53027.1 |
| quinolinate synthetase | PSDVSF_03130 | B7GIR9 | Negative | 326036 - 327076 | 37444.9 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | PSDVSF_03140 | P30011 | Negative | 327088 - 327957 | 31383.8 |
| magnesium transporter mgte | PSDVSF_03150 | O34442 | Positive | 328118 - 329452 | 48551.1 |
| chemotaxis protein chez | PSDVSF_03160 | P07800 | Negative | 329556 - 330293 | 27213.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
