Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair-coupling factor | PSDVSF_02970 | O52236 | Positive | 307310 - 310789 | 130818.0 |
| hypothetical protein | PSDVSF_02980 | Not Available | Positive | 310806 - 311822 | 38308.4 |
| hypothetical protein | PSDVSF_02990 | A7FPK5 | Positive | 311920 - 312888 | 36292.8 |
| hypothetical protein | PSDVSF_03000 | Q8DMX7 | Positive | 312888 - 313829 | 33947.1 |
| dna repair protein reco | PSDVSF_03010 | C6BV69 | Positive | 313857 - 314615 | 27899.7 |
| glycine--trna ligase alpha subunit | PSDVSF_03020 | C6BV68 | Positive | 314629 - 315498 | 33488.6 |
| glycine--trna ligase beta subunit | PSDVSF_03030 | Q30ZR6 | Positive | 315532 - 317640 | 76807.2 |
| 30s ribosomal protein s20 | PSDVSF_03040 | C6BV66 | Positive | 317760 - 318026 | 9988.26 |
| transcriptional regulator | PSDVSF_03050 | P29284 | Negative | 318224 - 318898 | 25032.5 |
| (4fe-4s)-binding protein | PSDVSF_03060 | Not Available | Positive | 319016 - 320317 | 47134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
