Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | PSDVSF_35230 | Not Available | Negative | 3735123 - 3736274 | 41706.0 |
| abc transporter atp-binding protein | PSDVSF_35240 | P45031 | Negative | 3736283 - 3737077 | 28910.3 |
| glycoprotein endopeptidase metalloprotease | PSDVSF_35250 | Q1RGU3 | Negative | 3737087 - 3738160 | 38509.0 |
| asnc family transcriptional regulator | PSDVSF_35260 | O59188 | Positive | 3738385 - 3738858 | 17085.6 |
| bifunctional protein puta | PSDVSF_35270 | Q9K9B2 | Positive | 3738880 - 3741903 | 111782.0 |
| n-acetyltransferase gcn5 | PSDVSF_35280 | Q9UT25 | Negative | 3741979 - 3742470 | 18252.4 |
| heme abc transporter atpase | PSDVSF_35290 | P43672 | Negative | 3742472 - 3744400 | 71937.4 |
| ribulose-phosphate 3-epimerase | PSDVSF_35300 | P74061 | Negative | 3744466 - 3745116 | 23695.9 |
| amino acid abc transporter substrate-binding protein | PSDVSF_35310 | Not Available | Positive | 3745310 - 3746083 | 28973.9 |
| hypothetical protein | PSDVSF_35320 | Not Available | Negative | 3746100 - 3746426 | 11621.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
