Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_02770 | Not Available | Positive | 289853 - 290611 | 27514.3 |
| ferredoxin:thioredoxin reductase | PSDVSF_02780 | Q55389 | Negative | 290757 - 291089 | 12903.5 |
| hypothetical protein | PSDVSF_02790 | P23171 | Negative | 291095 - 291457 | 13799.5 |
| amino acid abc transporter permease | PSDVSF_02800 | P0AEQ8 | Negative | 291459 - 292346 | 33388.6 |
| amino acid abc transporter substrate-binding protein | PSDVSF_02810 | P0AEN0 | Negative | 292359 - 293204 | 31603.3 |
| polar amino acid abc transporter permease | PSDVSF_02820 | P0AEQ8 | Negative | 293367 - 294179 | 30014.5 |
| thymidylate kinase | PSDVSF_02830 | C6BUG6 | Negative | 294300 - 294941 | 24211.2 |
| hdig domain-containing protein | PSDVSF_02840 | O07521 | Negative | 294917 - 295915 | 37397.7 |
| 5'-nucleotidase sure | PSDVSF_02850 | C6BUG4 | Positive | 296096 - 296848 | 27309.9 |
| glyceraldehyde-3-phosphate dehydrogenase | PSDVSF_02860 | P00362 | Positive | 296942 - 297925 | 34978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
