Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | PSDVSF_35130 | C6C1B2 | Positive | 3727188 - 3727592 | 15312.8 |
| lysr family transcriptional regulator | PSDVSF_35140 | P0ACR6 | Positive | 3727668 - 3728555 | 32808.6 |
| chorismate dehydratase | PSDVSF_35150 | Q9L0T8 | Negative | 3728563 - 3729387 | 30753.1 |
| cyclic dehypoxanthine futalosine synthase | PSDVSF_35160 | Q9K864 | Negative | 3729387 - 3730454 | 39992.9 |
| aminodeoxyfutalosine synthase | PSDVSF_35170 | Q5SK48 | Negative | 3730457 - 3731551 | 40649.0 |
| 1,4-dihydroxy-6-naphtoate synthase | PSDVSF_35180 | Q5SI12 | Positive | 3731695 - 3732522 | 29361.4 |
| membrane protein | PSDVSF_35190 | O31448 | Negative | 3732519 - 3733421 | 33408.9 |
| hypothetical protein | PSDVSF_35200 | Not Available | Negative | 3733594 - 3733863 | 9925.77 |
| upf0307 protein | PSDVSF_35210 | B7VKW1 | Negative | 3733957 - 3734490 | 20325.4 |
| hypothetical protein | PSDVSF_35220 | Not Available | Negative | 3734490 - 3735107 | 22932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
