Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna(gln) amidotransferase subunit a | PSDVSF_34270 | C6BSE9 | Positive | 3653490 - 3654947 | 51788.1 |
| hypothetical protein | PSDVSF_34280 | Not Available | Negative | 3655018 - 3655386 | 13528.5 |
| pp_03429 | PSDVSF_34290 | Not Available | Positive | 3655491 - 3656534 | Not Available |
| hypothetical protein | PSDVSF_34300 | Not Available | Negative | 3656529 - 3657134 | 22203.5 |
| radical sam protein | PSDVSF_34310 | Q9ZDB6 | Positive | 3657188 - 3658489 | 47620.2 |
| hypothetical protein | PSDVSF_34320 | Not Available | Positive | 3658486 - 3659022 | 20389.2 |
| hypothetical protein | PSDVSF_34330 | P44726 | Positive | 3659068 - 3659949 | 33229.3 |
| upf0296 protein | PSDVSF_34340 | Q30XT0 | Positive | 3659965 - 3660219 | 9178.99 |
| guanylate kinase | PSDVSF_34350 | Q30XT1 | Positive | 3660220 - 3660861 | 24063.3 |
| orotidine 5'-phosphate decarboxylase | PSDVSF_34360 | Q72DM8 | Positive | 3660854 - 3661558 | 24438.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
