Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_33270 | Q58921 | Positive | 3552679 - 3553425 | 26180.3 |
| n-acetyltransferase | PSDVSF_33280 | O31633 | Negative | 3553422 - 3553961 | 20221.1 |
| hypothetical protein | PSDVSF_33290 | Q5SID7 | Negative | 3553970 - 3554623 | 24297.0 |
| hypothetical protein | PSDVSF_33300 | P77302 | Negative | 3554705 - 3556642 | 73335.5 |
| hypothetical protein | PSDVSF_33310 | O27255 | Negative | 3556653 - 3556952 | 11011.3 |
| periplasmic | PSDVSF_33320 | Q06173 | Positive | 3557418 - 3558404 | 35182.5 |
| hydrogenase 2 large subunit | PSDVSF_33330 | P21852 | Positive | 3558470 - 3560188 | 62873.2 |
| qace family quaternary ammonium compound efflux smr transporter | PSDVSF_33340 | Q9X2N9 | Positive | 3560887 - 3561219 | 11562.9 |
| hydantoin utilization protein b | PSDVSF_33350 | P31881 | Negative | 3561372 - 3561629 | 9408.43 |
| hydrogenase expression/formation protein | PSDVSF_33360 | Q45251 | Negative | 3561598 - 3562152 | 20240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
