Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate phosphodiesterase | PSDVSF_32870 | Q55434 | Positive | 3514722 - 3515963 | 46449.1 |
| mfs transporter | PSDVSF_32880 | Q180E3 | Negative | 3515979 - 3517376 | 48906.4 |
| hypothetical protein | PSDVSF_32890 | P37503 | Negative | 3517376 - 3517729 | 13339.2 |
| hypothetical protein | PSDVSF_32900 | P0AEU2 | Positive | 3517932 - 3518738 | 30318.8 |
| s-adenosylmethionine synthase | PSDVSF_32910 | C6C1U5 | Negative | 3518853 - 3520022 | 42272.1 |
| aspartate 1-decarboxylase | PSDVSF_32920 | Q6ALV4 | Negative | 3520061 - 3520420 | 13027.6 |
| pantothenate synthetase | PSDVSF_32930 | C6C1U6 | Negative | 3520443 - 3521291 | 30989.4 |
| hypothetical protein | PSDVSF_32940 | Q73RG3 | Positive | 3521499 - 3523925 | 90076.6 |
| peptidase m48 | PSDVSF_32950 | Q6EPN8 | Negative | 3524050 - 3525282 | 45113.5 |
| hypothetical protein | PSDVSF_32960 | Not Available | Positive | 3525491 - 3526363 | 32613.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
