Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | PSDVSF_32490 | Q8XTT4 | Negative | 3472515 - 3474392 | 67695.6 |
| riboflavin biosynthesis protein | PSDVSF_32500 | P54575 | Negative | 3474397 - 3475380 | 36276.1 |
| hypothetical protein | PSDVSF_32510 | P66951 | Negative | 3475447 - 3476877 | 52950.4 |
| transcription termination factor rho | PSDVSF_32520 | Q1RIJ6 | Negative | 3477012 - 3478442 | 52780.6 |
| card family transcriptional regulator | PSDVSF_32530 | P9WJG2 | Negative | 3478731 - 3479246 | 19460.2 |
| peptidyl-trna hydrolase | PSDVSF_32540 | C6C0N2 | Negative | 3479328 - 3479945 | 22853.7 |
| 50s ribosomal protein l25 | PSDVSF_32550 | C4XHR1 | Negative | 3480071 - 3480724 | 23941.6 |
| ribose-phosphate pyrophosphokinase | PSDVSF_32560 | Q6AJL7 | Negative | 3480803 - 3481741 | 33602.7 |
| Trna-gln | Not Available | Not Available | Positive | 3481771 - 3481845 | Not Available |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | PSDVSF_32570 | C4XHQ9 | Negative | 3481950 - 3482822 | 31276.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
