Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh ubiquinone oxidoreductase | PSDVSF_31610 | Q8U0Z8 | Negative | 3379415 - 3379870 | 16155.5 |
| ech hydrogenase subunit echb | PSDVSF_31620 | P16430 | Negative | 3379870 - 3380715 | 30244.6 |
| oxidoreductase | PSDVSF_31630 | Q4L4W7 | Negative | 3380712 - 3382616 | 66409.3 |
| hypothetical protein | PSDVSF_31640 | O32207 | Negative | 3383047 - 3384165 | 40459.2 |
| tonb-dependent receptor | PSDVSF_31650 | A7MXY8 | Positive | 3384549 - 3386618 | 77811.2 |
| formylmethanofuran dehydrogenase subunit e | PSDVSF_31660 | O29816 | Positive | 3386648 - 3387304 | 23566.2 |
| sam-dependent methyltransferase | PSDVSF_31670 | P44150 | Positive | 3387291 - 3388133 | 32257.4 |
| abc transporter substrate-binding protein | PSDVSF_31680 | P44206 | Positive | 3388135 - 3389196 | 40784.2 |
| iron abc transporter permease | PSDVSF_31690 | Q57130 | Positive | 3389193 - 3390203 | 36060.0 |
| abc transporter | PSDVSF_31700 | Q57243 | Positive | 3390208 - 3391032 | 30288.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
