Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide epimerase | PSDVSF_31510 | P51981 | Positive | 3370314 - 3371279 | 34721.7 |
| d-amino acid aminotransferase | PSDVSF_31520 | P63511 | Positive | 3371355 - 3372167 | 29812.6 |
| hypothetical protein | PSDVSF_31530 | Not Available | Positive | 3372348 - 3372548 | 7622.07 |
| cytochrome c3 | PSDVSF_31540 | P00131 | Negative | 3372842 - 3373258 | 15138.7 |
| formate dehydrogenase subunit beta | PSDVSF_31550 | Q8GC87 | Negative | 3373281 - 3374033 | 27839.2 |
| formate dehydrogenase-n subunit alpha | PSDVSF_31560 | Q934F5 | Negative | 3374033 - 3377080 | 114076.0 |
| hypothetical protein | PSDVSF_31570 | Not Available | Negative | 3377102 - 3377332 | 8126.92 |
| hypothetical protein | PSDVSF_31580 | Not Available | Negative | 3377600 - 3377971 | 13689.7 |
| nadh dehydrogenase | PSDVSF_31590 | P31895 | Negative | 3377973 - 3379049 | 39911.7 |
| ech hydrogenase subunit echd | PSDVSF_31600 | Q28T74 | Negative | 3379050 - 3379418 | 13553.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
