Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PSDVSF_31210 | Q47539 | Positive | 3331900 - 3332652 | 27201.0 |
| abc transporter atp-binding protein | PSDVSF_31220 | Q57855 | Positive | 3332649 - 3333416 | 28043.3 |
| two-component sensor histidine kinase | PSDVSF_31230 | P0A4I7 | Negative | 3333538 - 3334800 | 47678.4 |
| dna-binding response regulator | PSDVSF_31240 | Q9HV32 | Negative | 3334790 - 3335470 | 25305.7 |
| resistance-nodulation-cell division multidrug efflux transporter mexd | PSDVSF_31250 | P52002 | Negative | 3335552 - 3338704 | 112777.0 |
| mexx family efflux pump subunit | PSDVSF_31260 | P0AE07 | Negative | 3338749 - 3339903 | 41476.0 |
| laci family transcriptional regulator | PSDVSF_31270 | Q9K6K2 | Negative | 3340216 - 3341223 | 36799.4 |
| phosphoenolpyruvate--protein phosphotransferase | PSDVSF_31280 | P23388 | Positive | 3341522 - 3343993 | 88548.5 |
| 1-phosphofructokinase | PSDVSF_31290 | P23386 | Positive | 3344007 - 3344957 | 33053.9 |
| pts fructose transporter subunit iibc | PSDVSF_31300 | P23387 | Positive | 3344971 - 3346701 | 59063.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
