Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase | PSDVSF_31110 | P16688 | Negative | 3318682 - 3319635 | 35463.9 |
| carbon-phosphorus lyase complex subunit phni | PSDVSF_31120 | Q52986 | Negative | 3319632 - 3320738 | 40669.5 |
| carbon-phosphorus lyase | PSDVSF_31130 | Q52985 | Negative | 3320740 - 3321339 | 21909.2 |
| phosphonate metabolism protein phng | PSDVSF_31140 | Q52984 | Negative | 3321349 - 3321825 | 17689.1 |
| phosphonate metabolism transcriptional regulator phnf | PSDVSF_31150 | O86029 | Positive | 3321910 - 3322635 | 27036.2 |
| acetyltransferase | PSDVSF_31160 | P26838 | Positive | 3322862 - 3323506 | 23945.2 |
| hypothetical protein | PSDVSF_31170 | A6SU94 | Positive | 3323510 - 3324232 | 26862.1 |
| ribose 1,5-bisphosphate phosphokinase phnn | PSDVSF_31180 | Q3SGK8 | Positive | 3324214 - 3324783 | 21502.1 |
| hypothetical protein | PSDVSF_31190 | Q1M755 | Negative | 3324970 - 3330174 | 180421.0 |
| aliphatic sulfonate abc transporter substrate-binding protein | PSDVSF_31200 | Q8YDR6 | Positive | 3330921 - 3331877 | 33963.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
