Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_30010 | A0A1I9LN01 | Negative | 3184630 - 3186192 | 57209.3 |
| spermidine/putrescine abc transporter substrate-binding protein | PSDVSF_30020 | Q9HY16 | Negative | 3186250 - 3187299 | 39428.6 |
| spermidine/putrescine abc transporter permease | PSDVSF_30030 | P0AFK8 | Negative | 3187292 - 3188110 | 30272.4 |
| spermidine/putrescine abc transporter permease | PSDVSF_30040 | P0AFK4 | Negative | 3188112 - 3189032 | 34477.1 |
| spermidine/putrescine import atp-binding protein pota | PSDVSF_30050 | Q03PF2 | Negative | 3189025 - 3190047 | 37970.1 |
| aldehyde ferredoxin oxidoreductase | PSDVSF_30060 | Q5JE15 | Negative | 3190059 - 3191840 | 64178.6 |
| 4-aminobutyrate--2-oxoglutarate transaminase | PSDVSF_30070 | Q88RB9 | Negative | 3191844 - 3193148 | 46249.8 |
| sigma-54-dependent fis family transcriptional regulator | PSDVSF_30080 | Q46802 | Negative | 3193532 - 3195238 | 63478.4 |
| hypothetical protein | PSDVSF_30090 | Q50414 | Positive | 3195449 - 3195922 | 17400.7 |
| sulfurtransferase | PSDVSF_30100 | Q94A65 | Positive | 3195945 - 3196478 | 19411.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
