Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | PSDVSF_29910 | P0AFB9 | Positive | 3172886 - 3173299 | 15199.7 |
| upf0721 transmembrane protein | PSDVSF_29920 | O32134 | Positive | 3173321 - 3174601 | 44403.0 |
| hypothetical protein | PSDVSF_29930 | Not Available | Positive | 3174603 - 3175289 | 25739.2 |
| hypothetical protein | PSDVSF_29940 | P0DOA0 | Positive | 3175417 - 3176907 | 55248.4 |
| sigma-54-dependent fis family transcriptional regulator | PSDVSF_29950 | P14375 | Positive | 3176904 - 3178244 | 49637.6 |
| mechanosensitive ion channel protein | PSDVSF_29960 | Q57362 | Negative | 3178276 - 3179553 | 47096.1 |
| n-carbamoylputrescine amidase | PSDVSF_29970 | Q3HVN1 | Negative | 3179799 - 3180680 | 32561.6 |
| agmatine deiminase | PSDVSF_29980 | Q82JP0 | Negative | 3180690 - 3181757 | 39826.4 |
| gamma-aminobutyraldehyde dehydrogenase | PSDVSF_29990 | A8GHZ8 | Negative | 3181777 - 3183210 | 50606.2 |
| putrescine aminotransferase | PSDVSF_30000 | B5FHV3 | Negative | 3183222 - 3184577 | 49353.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
